rs30223598 SNP Detail

Summary

• ID
  rs30223598
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:66446904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTGTCTGAA GACAGCTCCA GTGTACTCAT ATAAATAAAA
  ACTAAATAAA TCTTAAAAAG AAAAAAGAAA AGAAAGAGAA GAAGCCTCTG ACCTATGTGT
  M
  AACACCAAGC TTGTCCTAGG GGGGTTTTCT GAAAGCTTTC TTTTTTAACT TAATTAATTA
  ATTAATCAAT GTATTTGAAT ACACCGCCAC TGTCTTCAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss39661156	mCV24983712	ABI	CRAMUS_MOUSE	f	SNP	C	A
ss325660093	CHEV_18_66473487	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs30223598					SNP	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:66446904 () rs orientation: forward

Symbol	Name	Function Class
Gm15958	predicted gene 15958	within coordinates
Rr539712	regulatory region 539712	964 bp distal
Rr539713	regulatory region 539713	922 bp distal