rs30223105 SNP Detail

Summary

• ID
  rs30223105
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119544442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTTTGCATG TTACAGACAT GTGAAGGCTG GAGGTCAAAG
  GCTTAAGTGA CATAACCAGG GATGAGGCCA CACACTTTGA TGGCAGCAAA GCCTAGCTGG
  R
  AACCTGTTCT ACATCTGAGC TCCATGTGCA CCTGCCTTCA TGGTCAAGGT TTGTGCTGGT
  TCTTTGTCTG AGTAGGGCCA GTCTTCTGTC TGCCTCACT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45907341	mCV22718258	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	A
ss133591091	ENSMUSSNP1628698	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
ss321928736	CHEV_6_119517499	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30223105					SNP	A	A	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119544442 () rs orientation: forward

Symbol	Name	Function Class
Gm44317	predicted gene, 44317	within coordinates
Rr637715	regulatory region 637715	1556 bp distal