rs30218528 SNP Detail

Summary

• ID
  rs30218528
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7655695 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAAAACAT GGAGAGAAAT
  GACCAGTTGC AGGGTTCTAT AGCAGGACTT GGTTGCTGAA ACTTTGAAAG CACAAAGTTG
  GTCATTTTTT ACTTTCCAAA TTGGAATTCC TACTTGATTG ATCATCTTGA TTCTCAATGA
  AGTTTTGCTA GTTGTGCTAC TGCTACTGTC TGATGGGCTT CAGTGTGACC CTAGAGAATG
  R
  AGAAACAGTT ATGTGTTTGT GTTTATAGTG ACTTGCACAA GCTAAAGTAT CAGAGAGGAC
  ATATCAAAAG CCAAGATCAT CTAATAGGTA GGTGATGGGT GACAAGCAGC AATCCTACAG
  AATTATTCTA CAGAATCCAG GCATTATTCT GAGATCTTAG TGATGAATAT TGGACTCACT
  CTAAGGACCT TGACTGGACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss45905153	mCV24780950	ABI	CRAMUS_MOUSE	f	SNP		G	A					A	A
ss47784890	NES11725919	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	G	A	G		A	A	A		G	A	G		G
ss321734384	CHEV_6_7605695	CHEVERUD	SCREENING_POP	f	SNP												A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs30218528					SNP	G	G	A	A	G	A	G	A	A	A	A	A	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47784890	NES11725919	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7655695 () rs orientation: forward

Symbol	Name	Function Class
Gm35051	predicted gene, 35051	within coordinates
Rr626301	regulatory region 626301	1099 bp proximal