rs30217874 SNP Detail

Summary

• ID
  rs30217874
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153621594 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGCTG TTAAATTTAT GTTGCAGCTG
  M
  TATGGCCGAC ACCACAATCC TTCAC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45408163	mCV23502584	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
ss136115010	ENSMUSSNP6770488	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
ss321031774	CHEV_3_153578921	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30217874					SNP	A	C	C	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153621594 () rs orientation: forward

Symbol	Name	Function Class
Gm43400	predicted gene 43400	within coordinates
Rr587796	regulatory region 587796	1760 bp distal
Rr587797	regulatory region 587797	1307 bp proximal