rs30215874 SNP Detail

Summary

• ID
  rs30215874
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:106788778 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGACCCTTG GGGGCTCCCA GTGACTGAAC CAGCAACCAA
  AGAGCATTCA TGGATTAGAC CCAAATGCTG CCATATGTAA CTTGTTCTTC AGGCAACTGA
  Y
  TCTGTTTTCT GCCTGATCCC CTAACTGGGC TGGCTTGACT GGTCTCAGTG GGAGAAGATG
  TGCTGAGTCC TACAGTGACT TGAGGTGCCA GAATATTTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45407650	mCV23092484	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss135580652	ENSMUSSNP1020132	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30215874					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:106788778 () rs orientation: forward

Symbol	Name	Function Class
Rr582871	regulatory region 582871	1170 bp distal
Rr582872	regulatory region 582872	1252 bp distal