rs30214711 SNP Detail

Summary

• ID
  rs30214711
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:107509874 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATAGGAGTGG ACAACAAAAG TTGGCATGCT GTTTCCCATA TTTTCTGAAG TTGTTATTAT
  AATTATTATA CTCTTGTCCA GTGCCCTTTA TCTTTAAAGC CACCTACTTC ACATTGGAAA
  AAAAAATGAA TCGAGTCCAA GCTGAGTGAG AAGTGTTATC TTATGGCTTG GTGCATTTGG
  TGTCTAGAAG CTATGCAGAA GTCAGAAAGT AGCATTGGTG TGCTGAGCTC TTCTGGGACT
  TTCAAACTTG GCGTTGTTGT CCTCACGATG GAATTGAGGC ATGACTAAAA TAAGAGAGAG
  W
  GAGTGATAGA GAGAGAGAGA GAAAGAGGGA GAGAGAGAGA GACATGGCTT TTCTGAGCCC
  ACATGCCCCT TTGTTGTAAA AATTATCACA GGATAGTTTT GAAATCAAAC TAAGATGGCA
  CAATATCACA TCTTTGAACT GTCAAACCAT TGGCCTCCCT GGGCGAGATC TTTATTGCAC
  AAGTCTCATG CAGGAAAGAC TGAGTGAACA TTCCTTTGTA AATAAAAGCA GTAAGGTGCT
  TATTAGAAAA GATTACTCTG TTAAATAAAA GAAACACAAG CCAGAGCCAA CCACAGGAGG
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45905012	mCV23133292	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30214711					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:107509874 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17807	CpG island 17807	1546 bp distal
Lrrn1	leucine rich repeat protein 1, neuronal	Intron
Rr636001	regulatory region 636001	924 bp distal
Rr636003	regulatory region 636003	1584 bp proximal