rs30214520 SNP Detail

Summary

• ID
  rs30214520
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:28753541 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGC TTAACAGCAC CAGCCCAGGA
  M
  GGATGCTCAG GCTCTGCAAC TTCCC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45407737	mCV22688124	ABI	CRAMUS_MOUSE	f	SNP	C	A
ss134715503	ENSMUSSNP2697962	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
ss320690847	CHEV_3_28598314	CHEVERUD	SCREENING_POP	f	SNP			C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs30214520					SNP	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:28753541 () rs orientation: forward

Symbol	Name	Function Class
Rr574617	regulatory region 574617	1479 bp distal
Rr574618	regulatory region 574618	1201 bp distal
Rr574619	regulatory region 574619	855 bp distal
Rr574620	regulatory region 574620	101 bp proximal
Slc2a2	solute carrier family 2 (facilitated glucose transporter), member 2	Intron
Tssr28653	transcription start site region 28653	1480 bp downstream
Tssr28654	transcription start site region 28654	1412 bp downstream