rs30200466 SNP Detail

Summary

• ID
  rs30200466
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148572552 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACTCTACG GTGCATAAAA
  TAGCCGAAGT ATAAAACAGC ACTGTAAAGC AGTCTGAGAG AAATAGATCT CCCCCACCCC
  AGCACACAGA ACCCCAGGAT AGTGGGCAGC ATGGAGACTG AGGTAGAGAT AAGCCACCCA
  CAGGGGCACT ACAACCACGC AAACCCCAGG GACTGTTCTG ATGACAAGCA CAGGAGGGCT
  M
  CAGGATTAAG CAGCTAAGGT TTTTTTTTTT TTAATTTAAA ATATATCACA GTAAAATTGT
  AACTAAGGCT AGAATGATAC ATGGTAAATA TTAAAATAGT TAAGTTTGAA TGATAATGTG
  GCATTTTATT TTTTTTAAAG ACATCCTGCC CCATAAATTT AAAAAACATG ATCTAAGCAG
  TATATCCATT ACAATATAAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45404229	mCV23528705	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	C
ss136064591	ENSMUSSNP3324007	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30200466					SNP	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148572552 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr375898	regulatory region 375898	1156 bp downstream
Rr587218	regulatory region 587218	770 bp proximal