rs30177344 SNP Detail

Summary

• ID
  rs30177344
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:133962344 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAATAAGGAC AAACGAGAAA AGCACAAGAG AAGAGCTAAG
  GTCAGATGAG GAGAAAGAAT TAAGCCCTGA AATTGTCTGC TTCCAGAGAG ATATCATGGG
  R
  ACCCCTGAGG GACACTGGCG AGAATAAACT CCAAAATAAA AACGGATCTG GAAAAAAGAG
  AGAGATTTTT TTTCTTAAGA TTTTTTTTAT CTTGGTGTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45902770	mCV24005247	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss133768816	ENSMUSSNP2525185	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss321975817	CHEV_6_133935399	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30177344					SNP	A	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:133962344 () rs orientation: forward

Symbol	Name	Function Class
D6Mit290	DNA segment, Chr 6, Massachusetts Institute of Technology 290	1083 bp proximal
Rr380154	regulatory region 380154	1259 bp upstream
Rr639549	regulatory region 639549	25 bp distal