rs30169501 SNP Detail

Summary

• ID
  rs30169501
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr18:65809593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTCT GGAAATGGAA CTCAGATTAC
  Y
  AGGCCTGGCT GCAAGCACCA TTGCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39654212	mCV23468294	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss147317929	ENSMUSSNP6000980	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
ss325658063	CHEV_18_65836176	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30169501					SNP	T	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:65809593 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
D18Mit161	DNA segment, Chr 18, Massachusetts Institute of Technology 161			1110 bp proximal
Zfp532	zinc finger protein 532			Intron
				Noncoding-Transcript-Variant