rs30169072 SNP Detail

Summary

• ID
  rs30169072
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119541423 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTATCATGC TTTCTCATGT
  CAGAGCTGGG AGGGGCTCGC TCACACTGTG AATAGTGGGG GGGGGGGCGA GGGCATAGAA
  TGGTGGGTAC AGTGCTTAGT GCACAAGCAC GAGGACTCTA GTTCCATCCC CAGCACCCAC
  AGAAAAGACT GGGTGTTGTA TGCACGGGAA ATCCCAATGC TGGAAAGGCT GAGGCAACTT
  W
  ACCAACAAGT CTGCAGCAAC AAGGGACCCT GTCTCAAAAG GGATATGAGC ATGGCAGACA
  TAGTATATTT TGTTTGGTTT GGTTTGGTTT TTGTTGTTGT TTTCTTTTTC TTTTCTTTTC
  TTTTCTTTTC TTTTTTTTTT CTTCGAGACA GGGTTTCTCT GTGTAGCCCT CGATGTCCTT
  GGAGCTCACT CTGTAGACCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45900367	mCV22718305	ABI	CRAMUS_MOUSE	f	SNP	A		T	A
ss133591004	ENSMUSSNP606305	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs30169072					SNP	A	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119541423 () rs orientation: forward

Symbol	Name	Function Class
Gm44317	predicted gene, 44317	1762 bp upstream
Rr637713	regulatory region 637713	1603 bp distal
Rr637714	regulatory region 637714	784 bp distal
Rr637715	regulatory region 637715	1058 bp proximal