rs30166881 SNP Detail

Summary

• ID
  rs30166881
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:57520628 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCTTGTT CACCTTAGAA
  AAATATCCAA AATGGATGTA TCTGGAGGAT ATCATCCTTA GTGAGGTAAC CCAATCACAA
  AAGAACACAC ATGATAAGCA CTCAATGATA AGTGGATATT AACCCAGAAA CTTAGAATAC
  CCAAGATACA ATTTGCAAAA CACATGAAAC TCAAGAAGAA GGAAGACAAA AGTGTGGATA
  Y
  TTCATTTCTT CTTAGAATGG GGAACAAAAT ACCCATGGAA GGAGTTACAG AGACAAAGTT
  CAGAGCAGAG CCTGGCAGAA TGACTATTCA GAGACTGCCC CACTTGGAGA ACCACCCCAT
  AAACAACCAC CAAACCCAGA CACTAGGCAG ATGCCAATAA GAGCCTGCTG ACAGGAGCCT
  GATATAGCTG TCCCCTGCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45900242	mCV25134781	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30166881					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:57520628 () rs orientation: forward

Symbol	Name	Function Class
Gm45193	predicted gene 45193	within coordinates
Gm66279	predicted gene, 66279	within coordinates
Rr379418	regulatory region 379418	1319 bp downstream
Rr631144	regulatory region 631144	20 bp proximal
Rr631145	regulatory region 631145	1001 bp proximal