rs30163905 SNP Detail

Summary

• ID
  rs30163905
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17629502 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAAAATATG CATGTAGTTT CTAAAGACAC AGAATCCCTG
  TTTCCCCAAA ACTCCCTGGT TAGCTGACAC TAGGACTTTA CATGGGAAAA TAAGCTCAGG
  M
  AAATGGGGGT CATTTTTATG AAATGCAGCC TGCCTCTGAG ACTTGAACAT CAGTCTTTTG
  TTCCCCTCTC AGATCTGCTG GAGCTTGCTG CTTGCTTAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45900396	mCV23971761	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
ss133019255	ENSMUSSNP3649179	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		C
ss321755902	CHEV_6_17579503	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30163905					SNP	?	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17629502 () rs orientation: forward

Symbol	Name	Function Class
Rr626820	regulatory region 626820	104 bp distal
Rr626821	regulatory region 626821	306 bp proximal