rs30160807 SNP Detail

Summary

• ID
  rs30160807
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:63570203 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCTTAAAG CTGTGAAACG
  TGGTGAGACT TAGCCTCAGC ACTGAGAAGA GCGGGCCATT GGCCCACACT TAGTTCAGTC
  TCATTTCTCT AGACTGTCTA GCAGACCCCG CTGGGCTTGT GTACGAGCTA CCTCCCAGGT
  CATAGTGGAG ACATGTCTCT GGAAAAATCC ATTCTTTGGG CTCTATCCCT TTTTTCAAAT
  Y
  CCAAATTTTC TTTTGTTTAT GTACTCCACC CTTTTCCTTC TTCTTGGAAT AGTGTTGCAA
  TCCTATGGTT CTATGTTAGA CAGTGGGGCC TTTTCTAATG AGTGTTCTCT TTTGAAGTGC
  CCCATTGCAA TTGTCTTACA TCCCCAAGCC TATGCTAACT CCCCCAAGTA GGTCTCTCCT
  CTTGTGAAAG GAGGCTATAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45401251	mCV24524453	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss135242299	ENSMUSSNP227933	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30160807					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:63570203 () rs orientation: forward

Symbol	Name	Function Class
Rr577586	regulatory region 577586	1884 bp proximal