rs30156101 SNP Detail

Summary

• ID
  rs30156101
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:90567797 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTGGTGC CTTTCACTTC
  TCCCACCATG ACATCGTTGG GGAACTTTCC ATTTCGTTGG AGTCCATTGT TTTAATAGTC
  TGATAGTCAA ATTGAGAGCC ACAAAATGTT TCGTTAGAAT GTCTTCATTT CTGCTGAGTC
  AGTTATGTTC TCAGCACACA CTTGTGGCTG CTGCTGTCAG ACAACCCTGC TGCCCACTTA
  R
  AGGGACTGCT ATCTGGTGGT TATTGTTCAT GGACCCACGC CTTACTCATT CTACCAAGGA
  TGCTGGCAGG AAGCCCTCAT TCATAAACAC CTTTAAGTTC AGTGAGCCCG AGGAGAGGTG
  TTAAGTGGCA TATGTGCCTC AGTTTCCTTA TGCTTTACAC AGGGAAAATT TTACTTGTAA
  AGTTTACTCT ACTAGACTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45401792	mCV24984136	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss135478356	ENSMUSSNP3086952	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30156101					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:90567797 () rs orientation: forward

Symbol	Name	Function Class
Gm57853	predicted gene, 57853	1821 bp downstream
Tssr946	transcription start site region 946	500 bp downstream
Tssr30264	transcription start site region 30264	830 bp downstream
Tssr34247	transcription start site region 34247	1054 bp upstream
Tssr34248	transcription start site region 34248	1042 bp upstream