rs30151485 SNP Detail

Summary

• ID
  rs30151485
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:9463436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGA CAGAGCTAGT CACAAGCTTG
  Y
  CAATGTCACC TTGGGAAGCT GGCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45400586	mCV23607744	ABI	CRAMUS_MOUSE	f	SNP		T	C					T		T
ss60369255	NES15871206	PERLEGEN	MM_PANEL2	f	SNP	T		C	T	C	T	C		C	T	T	T		C	T	T	C		C
ss134574425	ENSMUSSNP6763700	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C							T
ss320650878	CHEV_3_9398376	CHEVERUD	SCREENING_POP	f	SNP													T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30151485					SNP	T	T	C	T	C	T	C	T	C	T	T	T	T	C	T	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60369255	NES15871206	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9463436 () rs orientation: forward

Symbol	Name	Function Class
Rr374488	regulatory region 374488	within coordinates
Rr573417	regulatory region 573417	within coordinates
Rr573418	regulatory region 573418	1764 bp proximal
Rr573419	regulatory region 573419	1975 bp proximal