rs30131865 SNP Detail

Summary

• ID
  rs30131865
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr18:65809634 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACCA TTGCTTACGA AAGCCTCACA
  Y
  AGACCCTCAG GAGAGTCTTA GTCAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39650913	mCV23468293	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss147317934	ENSMUSSNP6589205	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30131865					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:65809634 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
D18Mit161	DNA segment, Chr 18, Massachusetts Institute of Technology 161			1069 bp proximal
Zfp532	zinc finger protein 532			Intron
				Noncoding-Transcript-Variant