rs30129645 SNP Detail

Summary

• ID
  rs30129645
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37729718 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAGT GGCAGGGCCT GGGGAACACT
  R
  GTGTTTTCTG TGAGTCAGCT TGCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45398920	mCV22777451	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss134810703	ENSMUSSNP3992849	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss320711646	CHEV_3_37574491	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30129645					SNP	A	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37729718 () rs orientation: forward

Symbol	Name	Function Class
Rr374835	regulatory region 374835	1148 bp downstream
Rr406863	regulatory region 406863	1493 bp distal
Rr575538	regulatory region 575538	1311 bp distal
Rr575539	regulatory region 575539	within coordinates