rs30129124 SNP Detail

Summary

• ID
  rs30129124
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108425703 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGAGCTAAC CCCAGAGTCA GGGACTGTTC TCCCGCAACA
  TGTAGGGACT TATAGGTGGT TTTTGGCATT GAGACTGATA AAAACAGCCT GGCATCTCCA
  K
  GGGGCATATC CCACCCCACT CCCAGAACTG TGCATGCCAG TCAACTAGAG GGATCTGAAC
  AGTGAGGCCA CTTACACTTG CAAAAAAAAT ACCACCACA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45898639	mCV23380671	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30129124					SNP	T	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108425703 () rs orientation: forward

Symbol	Name	Function Class
Itpr1	inositol 1,4,5-trisphosphate receptor 1	Intron
Rr636108	regulatory region 636108	1670 bp distal
Rr636109	regulatory region 636109	within coordinates
Rr636110	regulatory region 636110	1849 bp proximal