rs30122234 SNP Detail

Summary

• ID
  rs30122234
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119453489 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTACTTCCTG AAATGTTTCT GGCTGTTATT GAATGTGGTA GTGATCTCAC GGCTGAAACA
  CCTTGCAACT TTTTTTTTTT TTTTTTTTTT TTTTGAGACA ATGTTTCTCT GTGTAGCCCT
  GGCTGTCCTG GAACTCACTT TGTAGACCAG GCTGGCCTCA AACTCAGAAA TCCGCCTGCC
  TCTGCCTCCC GAGTGCTGGG ATTAAAGGCG TGCGCCACCA CGCCCGGCTG CCTTGCAACT
  TTTAACTGAA CACCTTAAAT GTAAAGCTTT TTATTAGTAA AATTCCAGTG TTAAACTCAA
  R
  AAAGTTTTGC TAAAGTTAAG TAGGACCGTG CTCACCTTTT CCGAGGTGCC ATTGGATGGC
  TGTTCTAAAC GACCTTTCTA GGAAGCCAAA CCTCAGGGGT CCACACTGTA CAGCCTAGGC
  CCATCACTGT GCTTTGTGTG AAATGGGGTT AGGGCACACT ATGGTCGTTA GATATGGTGG
  CTTGCACCTA TAATTCCAGC ATTTGGAAAG CTGAGGTAGG AGGACTGACC ACTATATCCA
  GACCAACTCT GGCTACACAG TGAGTTCCAA GTCAGCCAGG AAAAGAAATG AAAGAAAAGA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45895779	mCV24874535	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30122234					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119453489 () rs orientation: forward

Symbol	Name	Function Class
Rr637690	regulatory region 637690	1128 bp proximal
Wnt5b	wingless-type MMTV integration site family, member 5B	Intron