rs30120594 SNP Detail

Summary

• ID
  rs30120594
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:133452826 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATAGTAAG TTCAAGGCCA
  ACCTGGGTTA TGTAAGACAC TGACTGGGGG AAGAAAGGCA AAAACAAAAG CATCAGATAC
  ACACAATCCA AAAACTCAGA TATTAGTCAG CAATGTACAC TGATACCTCA GAAATCTAAG
  AAAAACAATA ACAATAACAA CAACAAAACA AAACAGAAAA CCAGTTCATA ACAGTCAAAG
  S
  TAGGCTGATT CTCATTTCTA AAGCAAGGGA CTTCTTTATA GCATTTTTAG ATATTTTTGT
  TTCACTGTTT TCACGAACAC TTTGATTAAT CTTATTTCCA TTTTATTCAT TGTGATCCTA
  GGGTTTTAAC CCAGGGGGTC ACATATGCTA GGCAAATGCT CTACCACTGA GCTATAACCC
  ATCCCTGAAA ATTAGCCTAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45398474	mCV23615513	ABI	CRAMUS_MOUSE	f	SNP	C	G	G	G
ss135918895	ENSMUSSNP3175879	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30120594					SNP	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:133452826 () rs orientation: forward

Symbol	Name	Function Class
Gm64379	predicted gene, 64379	within coordinates
Rr585594	regulatory region 585594	1439 bp proximal