rs30111824 SNP Detail

Summary

• ID
  rs30111824
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:64165411 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGATGCGA GTGGGTAGGT
  GGGAGAGGAG CATCTTCATA GAAGCAGGGG AAGGGGGAAT AGGATAGGAG GCTTCTGAAG
  GGGAAACTGG TTAAATATAA GTACTTAAAT ATCCATTAAA AAATAGAAAA ATAAGCTATA
  ATCATATTTT CAGGAAGATA TTTTTTCTGT TATAAGACTG TTTTATAGCA ATGCATATAT
  R
  TTTAATCAAC AAAGGATAGA TTGATCTATT TTAGATAAAA ATTTTACTTT AAGATTCTAA
  AGTTATACAT GAAAAACGTT TCATTATTTG TGGTGATATA ATAGACAAAC AGATTATCAA
  ATTATTTGAT AATTTGTTAC TCGTGAAATT CTTAACTCAA ATATACCCCT GTAATTTTAG
  TTGGTTATAC TTATAGAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49602000	NES12894129	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30111824					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49602000	NES12894129	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:64165411 () rs orientation: forward

Symbol	Name	Function Class
Rr577622	regulatory region 577622	1608 bp proximal
Vmn2r3	vomeronasal 2, receptor 3	mRNA-UTR