rs30111716 SNP Detail

Summary

• ID
  rs30111716
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:153649395 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAT TCTAAAACTA CAGCTTTCGG
  K
  GCCAGAGGCA ACTTCAGTCC AGTTT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45395673	mCV23501568	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T	T
ss136115295	ENSMUSSNP6054573	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T		T
ss321031905	CHEV_3_153606722	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30111716					SNP	G	G	T	T	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153649395 () rs orientation: forward

Symbol	Name	Function Class
Acadm	acyl-Coenzyme A dehydrogenase, medium chain	Intron
Cpgi13964	CpG island 13964	222 bp proximal
Rr587801	regulatory region 587801	within coordinates
Rr587802	regulatory region 587802	864 bp proximal
Tssr32439	transcription start site region 32439	1093 bp upstream
Tssr36252	transcription start site region 36252	667 bp downstream
Tssr36253	transcription start site region 36253	703 bp downstream
Tssr36254	transcription start site region 36254	874 bp downstream