rs30111680 SNP Detail

Summary

• ID
  rs30111680
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138352827 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGAA TCCATACATT TGGCTGCAGG
  Y
  CCACATTTCT GTGTTGAAAT TTAGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45397404	mCV22920448	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	T
ss135955770	ENSMUSSNP4930932	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
ss320980838	CHEV_3_138310030	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30111680					SNP	T	T	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138352827 () rs orientation: forward

Symbol	Name	Function Class
Rr586173	regulatory region 586173	1342 bp distal
Rr586174	regulatory region 586174	1488 bp distal
Rr586175	regulatory region 586175	162 bp distal