rs30111483 SNP Detail

Summary

• ID
  rs30111483
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:135390253 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACAACCTTG ACTTCGAGCC
  CCAAGATCCA CATGGTGAAA GCAGAGAACT AACTCCTGTG AGTTGTCTCC TCATTCCCCA
  AACTACATTA ATAAATGTAA TTATTTAAAA CGTTCACCAT AGGTAGAGCT TTGTACTAGA
  TGCTACTGTC TTCTATACCA TGCCCACGCC TTAACAAAAA TGATATGAAA GCCTTTAAGC
  M
  AGCCTTAATA GGCAAACACC AATAAAAGGC TATGCCTACA AAGAAATCCA TGTATAAGAA
  CTGACAGCTA GGGGAGCATC TTGAAGAGTC ATTAAAACAT GAGGTAGTAC TCAGCTATTA
  AAAACAATGA ATTTATGAAA TTCTTAGGCA AATGGATGGA TCTGGAGGAT ATCATCCTGA
  GTGAGGTAAC CCAATCACAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45396940	mCV25339497	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	C
ss135928479	ENSMUSSNP1312114	ENSEMBL	ENSEMBL_Sanger	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs30111483					SNP	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:135390253 () rs orientation: forward

Symbol	Name	Function Class
Nfkb1	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105	Intron
Rr585765	regulatory region 585765	1982 bp proximal