rs30111186 SNP Detail

Summary

• ID
  rs30111186
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52739838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGGAGGGCCA AAGGGCAGGT GCTATGAAGC AACATCCTGA GCTACTTTAA GCTCCAGAGC
  AGCATTGAAA ACAGGTGAAT CCCCAACCCT TCACCCTGCT TCCTTATTCT GTGAACTGAG
  ACATTCAGAT CAGAGCAAGA GCAAAGAAAG ATCTGACTTC TTATAAACCG TCTCAGTTTC
  CATGTTTTCT TCCAGGCACA GTTGTGCTGG TTCATCTTTT TCTACACCCT CCATCCTTCC
  AAGATGCCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC
  W
  CTCACACACA CACACACACA CACACACACA CACACTTCAC TTACTTGCAA CCATCTTTAA
  CAATGCAAAC AGGAGGAACA AGGTAAGATG GAGTGTTTGG GGTAGAGGTG TGCAGCAGCC
  AAGTGCTGTC ACAATCAGCA CACCCAAGCA CCGTTTGTAA TAGATTGTTC CTGTAAATTA
  GCGGCTCTAG CTGACAGAGC TATGAGTGCT TTTGGAAAGC TTCTCTATCA GTGTCAAAAT
  CAAAGGCAGA GGGCGCGGAG AAGGCTGGGT TTAGCAGGGT GGCATTTTAG ATGTGGATTT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45395850	mCV24464737	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30111186					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52739838 () rs orientation: forward

Symbol	Name	Function Class
Rr576587	regulatory region 576587	90 bp distal