rs30110826 SNP Detail

Summary

• ID
  rs30110826
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37841499 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTT TGTCCCAAAA ACAGAAAAGT
  Y
  GCTACTGCAG TGAGAAAAGC AAAGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	CAST/EiJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	SM/J
ss46914836	NES10819697	PERLEGEN	MM_PANEL2	f	SNP	C	C		T	C
ss320712793	CHEV_3_37686272	CHEVERUD	SCREENING_POP	f	SNP			C			T
SNP Consensus Information
SNP					Consensus Type	AKR/J	CAST/EiJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	SM/J
rs30110826					SNP	C	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46914836	NES10819697	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37841499 () rs orientation: forward

Symbol	Name	Function Class
Rr575564	regulatory region 575564	229 bp distal
Rr575565	regulatory region 575565	1001 bp proximal
Rr575566	regulatory region 575566	1972 bp proximal