rs30110362 SNP Detail

Summary

• ID
  rs30110362
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:133456533 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTCACTTT AATTAAAGAA
  CCAAGTGGGG TATATGGGTA TAGCTCAGTG GCATATACAA CCTTTGTTTT ACATGCGAAG
  CTCCTAAGTT TGGTCTCTAG CATTGTGAGA AATCCAAACA CAAATGAACT GAAAGTTAGT
  CAATAATGGT ACAAAGAGGC TGGCTTCATC CGCCTATGTC CTGGAGTTCT TGTTCATGGA
  Y
  GACAGGTTTT GCTCCTTGTA CAACTTGCCT TGAGCCAATG ATTTATGTAG ACAGTATAAC
  CATGGGCAAG CATGAGAGCC TTAACTTATT TATTACTGCT TAAGTAAAAT TAATCATGTT
  TCATCCACAT GAGATTTTAT ATGCTATGAA TACTCCCCTT GTTCACTTGT AAAAGATCTG
  GCAGAAGAAA AGTAAAAGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45396926	mCV23615349	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30110362					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:133456533 () rs orientation: forward

Symbol	Name	Function Class
Gm64379	predicted gene, 64379	1218 bp upstream
Rr398038	regulatory region 398038	1315 bp downstream
Rr585594	regulatory region 585594	1245 bp distal
Rr585595	regulatory region 585595	1144 bp distal
Rr585596	regulatory region 585596	325 bp proximal
Tssr35771	transcription start site region 35771	1231 bp upstream