rs30109412 SNP Detail

Summary

• ID
  rs30109412
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:50306697 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCGTCAAT CACAGAGGAA
  CGAGGAGACC AGAAAAGGCT TCTGGCCTGC GGGCGTGTAC ACAGCGGACA AGAACCACCA
  ACAGACATTG GGCTACACAA GTGGAGGGGA AGGTGACCTT AACTCTGACT CGTGGGAGCT
  AGACCCTGGT GAGGACTAAC TTAGGACAAG GTAATTTCCT GGAATTGAGT CCCTCATCAG
  Y
  CCAGGTACTT CGCTGGCTGG CTGGGGTGAC TCTTGTCATG CATCTGGCAA GGGAGCCACA
  GAGCAGGCTG AAAGGCAGTC CAGGCAGATG CTGTCAAACC CAAAGGTCTC ATGAGTTCAG
  GATGCTCTGA TCAACTCGTC AACACACCCT GTGCCCCGAT GACATCCCTG AATATATCCT
  AGTAGTTAAA CACCTCACGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss45894394	mCV27582389	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs30109412					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50306697 () rs orientation: forward

Symbol	Name	Function Class
Osbpl3	oxysterol binding protein-like 3	Intron
Rr629984	regulatory region 629984	393 bp distal