rs30105734 SNP Detail

Summary

• ID
  rs30105734
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37719890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACTCAGGAC TACAGTTAGG TCTAGAGTAC CTGGCTGTAG
  TCTCAAACAA CTGGAATAAA GACTTCTAAT TGGCTATAAA CTGTGTATGA GTGGCCATCT
  Y
  TGGTGGCATC CTGCATCTCT CCCCCCAACC CCCAGCAATT CCTTTAGGCT CCAACCTAGC
  ACCAGCTTGC ATTGCCACTG TCTGTGCACA GTCAGCCTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss45395607	mCV25186178	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss134810547	ENSMUSSNP2836926	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss320711609	CHEV_3_37564663	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs30105734					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37719890 () rs orientation: forward

Symbol	Name	Function Class
Rr575535	regulatory region 575535	547 bp proximal
Rr575536	regulatory region 575536	1874 bp proximal