rs30099974 SNP Detail

Summary

• ID
  rs30099974
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124067466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACAAAACAAA GAGAAATTAT TATTTTGACA TTTGAGCCTG AGCCAAACCA TTTACCTTTC
  TCCTCATATT CTTTTCTGTT TATATATAAA TTCTAAAAAC TGATGTGCTG TAGTGAATAT
  TGGGAAAATC AAAACAAGAC TGTACAGAGA ATAAGGTGGA ATATCTGTGA TTTTTTTATT
  ATTACTATTA TTTAGTTTAT TATATAATTA GCCACTACTC TTTCCTTTCA TCCCTCTAAA
  CTTTCCATAT AACCTTCCTT GCTCCCTCTC AATTGCATGG TGTCTTTTAA AGTTAACATA
  K
  ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATCC ATTCATGTGT
  GTGTGATATG CATACTACAG TGTGGATGTG CACAGCAGAG TATGGATTCA GGGTGTCACT
  TTTCACTTTC CACCCTGTTA GAGGCAAGGT CTCTCTTGTT TCTGTGACTG CCTGTAGATG
  AACACTGTAG CATTTACCTT CTTACATAGG TGCTGGGCTC TGATTTCAGG TTGTCGAGTT
  TGCCCAGAAA GTACTTTGCC CCACTAAGCC CGCTCTCTGG CTCCAAATCA GCAATGGACT
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45394196	mCV24048916	ABI	CRAMUS_MOUSE	f	SNP	G	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30099974					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124067466 () rs orientation: forward

Symbol	Name	Function Class
Gm43731	predicted gene 43731	within coordinates
Rr584584	regulatory region 584584	457 bp distal
Rr584585	regulatory region 584585	1078 bp proximal