rs30092720 SNP Detail

Summary

• ID
  rs30092720
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115614959 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAGTATAG ACTTGGCAGC
  ATTGGGAATT AGTTGAGTAT GAGGAAAAGG GGAGAGAGAA CTGCATAAAC CAACGGGCAA
  ATGTTCACGG AACAAGTGTA ACCTAATGAA AATTTAGCTC ACAGGACTGA GAGGGGGCAA
  TGTGGGTGAA CAGTGTGAGA GCCTGACTTC AGTCCCCAGG ACCTGTGATA GAAGGAGAGC
  R
  CCAACTTGTG AGAGCTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GACTTGTAGG
  AGTCACATCT CTCCTACCAT GTGGGATCCA GGGATAGAAG TCAGGTCATC TGGCTTGGTA
  GTAAGTGCCT CCACCTCCTG AGCCATCCAG CCTGGATTCT TGCTATTTGA GATGCGTTAG
  CAGAGATTGA AAACTAGAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss46914051	NES10688747	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs30092720					SNP	A	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46914051	NES10688747	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115614959 () rs orientation: forward

Symbol	Name	Function Class
Rr583609	regulatory region 583609	732 bp distal
Rr583610	regulatory region 583610	1253 bp proximal