rs30092714 SNP Detail

Summary

• ID
  rs30092714
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115614818 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGATTTATG TTGTAAGATC
  ATTGTTTCCT CTGCTCTGGG ACAAGTGGAT GTAGAGGCGG CAGTGGAAGT GTGGTGACAG
  CTAGGGAGAT GGTGTTCCAT TTTCAAGAGG TAGAGACGGT AGTGGCTTTG GCCGAGAAGG
  AAAGAGTATA GACTTGGCAG CATTGGGAAT TAGTTGAGTA TGAGGAAAAG GGGAGAGAGA
  R
  CTGCATAAAC CAACGGGCAA ATGTTCACGG AACAAGTGTA ACCTAATGAA AATTTAGCTC
  ACAGGACTGA GAGGGGGCAA TGTGGGTGAA CAGTGTGAGA GCCTGACTTC AGTCCCCAGG
  ACCTGTGATA GAAGGAGAGC ACCAACTTGT GAGAGCTGTG TGTGTGTGTG TGTGTGTGTG
  TGTGTGTGTG TGACTTGTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46914045	NES10688745	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30092714					SNP	A	A	A	A	A	A	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46914045	NES10688745	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115614818 () rs orientation: forward

Symbol	Name	Function Class
Rr583609	regulatory region 583609	591 bp distal
Rr583610	regulatory region 583610	1394 bp proximal