rs30091851 SNP Detail

Summary

• ID
  rs30091851
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115614303 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGACAGAT CTAATGTGCT
  GGGACCCGGA GCGAGAGAAG GAGCCGCTGA ATAAGAAGGT GGCAGAGCTT AACTGTGGGT
  TCACCCAGTG TGCGATGTGG GACTTTGGTC TCCTGATTGA GCCTGTCTGT GCCTTAGCTC
  CCTTTTCCAT TAGATGAGCA GTGCGTGTGA CCTGTCCCAC CAACTGCTGT GATGAGTGCA
  Y
  GCACGGGTGT TTGGAAGGTA TGACGATGTG TCCCCAGTGC ACAGAATAAG CAAATGGGTA
  ATAGCTATTA TCGAAGCACC ATTCTTATTC CAGAAGAAGT CAGCAAGTGT GAAAGCCTTA
  GGCAGGCAAG ACCCTCAGAA CATCAAACTG AAGTAAGTTT GTGGTGCCAA CAGAGCAGGT
  GAAGAGACCT TAAGTGGTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46914042	NES10688949	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30091851					SNP	C	C	C	C	C	C	C	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46914042	NES10688949	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115614303 () rs orientation: forward

Symbol	Name	Function Class
Rr583609	regulatory region 583609	76 bp distal
Rr583610	regulatory region 583610	1909 bp proximal