rs30067488 SNP Detail

Summary

• ID
  rs30067488
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:69436065 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGTTTTGTT CCCAATTCTA AGGGGCAAAG TGTCCACACT
  TGGTCTTCGT TCTTCTTGAG TTTCATGCGT TTAGCAAATT GTATCTTATA TCTTGGGTAT
  Y
  CTAAGTTTCT GGGCTAATAT CCACTTATCA GTGAGTACAT ATTGTGTGAG TTCTTTTGTG
  ATTGGGTTAC CTCACTCAGG ATGATGCCCT CCAGGTCCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45546950	mCV23279591	ABI	CRAMUS_MOUSE	f	SNP	C		C	T	C
ss45891600	mCV24006205	ABI	CRAMUS_MOUSE	f	SNP		T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30067488					SNP	C	T	?	?	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69436065 () rs orientation: forward

Symbol	Name	Function Class
Ppm1l	protein phosphatase 1 (formerly 2C)-like	Intron
Rr578196	regulatory region 578196	959 bp distal