rs30066555 SNP Detail

Summary

• ID
  rs30066555
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86760478 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATTT AAGAACTTTA AGTGGGAGCC
  R
  GCTCCCCATG TAGAAATGGC AGGTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45891586	mCV25186133	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss133359268	ENSMUSSNP209873	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss321847234	CHEV_6_86733490	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30066555					SNP	A	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86760478 () rs orientation: forward

Symbol	Name	Function Class
Anxa4	annexin A4	Intron
Rr633511	regulatory region 633511	767 bp distal
Rr633512	regulatory region 633512	1290 bp proximal
Tssr57506	transcription start site region 57506	1566 bp upstream
Tssr57507	transcription start site region 57507	1991 bp upstream
Tssr61859	transcription start site region 61859	26 bp downstream