rs30066460 SNP Detail

Summary

• ID
  rs30066460
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125099621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAATGAAG AAGGCAAATC
  CTATATGTTG AGTAGCACTC AAGTTTGCCT TGCATTCTGA GGTCAGAAGT TTAATTATTA
  TATTAATAGT CAATGCTCCC CATTGGTACA GATAAAAAAC ATTATACATA TTTTAAAGGT
  TTGTTTCTAT GAGAAAAAAA AGCCTCCATA AAAATTTTCT AGCTGGGCAG TGGTGGTGCA
  Y
  GCCTTTAATC CCAGCACTTG GGAGGCAGAG GCAGGCAGTT TTTTGAGTTT GAGGCCAGTC
  TGGTCTACAA AATAAGTTCC AGGACAGCCA GGGCTATACA GAGAACCCCT GTCTCGAAAA
  ACCAAAATAT CAAAAAAAAA AAAAAAAAAA AAAAAAAAAA GAAAGAAAGA AAGAAAGAAA
  GAAAGAAAGG AAGAAAGAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45393024	mCV24036434	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss320935447	CHEV_3_125008890	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs30066460					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125099621 () rs orientation: forward

Symbol	Name	Function Class
Rr584607	regulatory region 584607	769 bp proximal