rs30064962 SNP Detail

Summary

• ID
  rs30064962
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:22536159 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGGATTGCAT GGATGACATT TTCTATTCTA TATAAAGACA TGTTTTACAG CAGCAGATAA
  CCTGACAAAC TTTCTGTCCT CCTCCTCTTT GATATTCCTT GAGCCTTAGG TGTAAGGGTT
  TTGTTGTAGA TGGATCAGTT GGGGCTGGCG CCACATGATT CTCTGATTTA CAGCCAGTTC
  CGAATTTCTA TAATGATCTT TTCGGAATAA AAAAAAAAAA AAAAAAAAAA AGCTTCTTTG
  CTATGGAGTG AGCAGTGCAC ATATCTGTGG GTAGAAGGTT GAGAATTTAC AGGGCAATTA
  R
  AAATTATACT GGCTTACAAA TGGTACTAGT AGGCTCTCTA GTTTACTTGG CCTCATCAGT
  CATGGGTAAT CAGACCAGCT TTACAATTGC AGGCATGAAT TCCCTCCTAC TAAATATGTC
  TTCAGTTCAA TTAGACAGCT GCTTGTTACC ACCAATATGT AAGTGTGGTT TCTGTAGCTT
  TGGGGAATCT TGCCATGCTG GTCATTTTTG TGTTTTGTAG GCATCACAGC TGGGTAGGAC
  AACTGATGGC TTTTCTCTCT TGGCAGTGTG TAGAGCACCT CACACCACGA TGAGAGCTGG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45889544	mCV24713956	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30064962					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:22536159 () rs orientation: forward

Symbol	Name	Function Class
Rr627119	regulatory region 627119	1249 bp proximal
Rr627120	regulatory region 627120	1305 bp proximal