rs30064634 SNP Detail

Summary

• ID
  rs30064634
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108826095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCTGGCAGGC TTGTGTTGAG AAGGGCTGGG GAGACAGCTC AGTGGGTAAG AGTGTTGCTG
  TGTGAACCTG CAGGCCTGAG TTTGAATCTT CAGCACGCAC CTAAAAGGAC AGTGGTGGCA
  GCATGGCCCC GTCATTCCAG GGCTGGGGGA GAGGGGTAGG CAGGGCACAG AGATGAGAAG
  TTTAGTGGGG GTTGACTGTT GCTAGCCTAG CTCCAGGGAG TAAGGGGGAG AGTGACAGAG
  CAGCCTACCT CAGCCATAGG GATAAGCATG AGTAAATGCA CACGTGTACA TATGGAGCGC
  R
  CGCGCACACA CACACAGAAC ACACACACAC ACACACACAC ACACACGGAG GGGGGAGGGA
  GAGGGAGGGA GGGAGAGAGA GATTATTGGG AAAGCTCCTC TCTTCTGTTA TTCTTAGCAT
  TCTCTGGCTC CTTTGGATTT GGGAGGTTAC TAGCACATCT TGATCGCTCT GTGAAATTAG
  TCCCTAGCCG TGCAAATCTG CTTGAGAGTT TAGATTATTT GCCTGTATTG TCTTTCTAGG
  TTCTGATAGG GGATGTGGAA GATGCCATCT GCCTACACGC CTTCTACTAT GCCATATGGA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45890396	mCV24064517	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30064634					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108826095 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Edem1	ER degradation enhancer, mannosidase alpha-like 1			Intron
				Noncoding-Transcript-Variant
Rr636224	regulatory region 636224			1524 bp distal