rs30064625 SNP Detail

Summary

• ID
  rs30064625
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:96455553 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGAACAGGA CAACGGCAGA GCTTTAGAAG
  CCAAGACTGC TCAGTTCCTG CCCATTCTCA GGACGAAGTA TTTATCACCA CCACATAGCA
  GTGAAACTAC ATGTTTCCTG AAATAAAACT CATGTATGGC CTCTTGTATG TACAGTCtgt
  S
  tgtgtgtgtg tgtgtgcgtg tgtgtgtgtg tgtgtgtatg catgtgtATT AATGAGATGA
  GAGCAGAAGG GGGCCTATGT GGAAGAAGGA GAGGAGCCCA GACAAGGAAC AGTAGTGGGT
  ATACAACAAG ATATGTGTCA TATCTTGTTA                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss45393197	mCV22851523	ABI	CRAMUS_MOUSE	f	SNP	C	G	C
ss320842019	CHEV_3_96352160	CHEVERUD	SCREENING_POP	f	SNP				C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs30064625					SNP	C	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:96455553 () rs orientation: forward

Symbol	Name	Function Class
Rr397861	regulatory region 397861	568 bp downstream
Rr581314	regulatory region 581314	254 bp distal
Rr581315	regulatory region 581315	667 bp distal
Rr581316	regulatory region 581316	1195 bp proximal