rs30064610 SNP Detail

Summary

• ID
  rs30064610
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108424837 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCGTGCCAAC TTCTGTGTTC CTTCCTACTA AGATGTTCCC
  ACCAGCACCC GGGGTGTGTG TGTGGGGGGG GGGGGGGAGT TCCCTTCGTG TCCTCTTCCC
  Y
  GCAGAGGACA GGGGTTGTCC TTACCTGGAA TGTGGAGGAA GAAAATCTGT CTATGAACTT
  CCATGACTTT AAAAGGTTAA AAGCTGATAC AGATGTTTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45889814	mCV23380950	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss133502610	ENSMUSSNP919200	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss321892718	CHEV_6_108397870	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30064610					SNP	C	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108424837 () rs orientation: forward

Symbol	Name	Function Class
Itpr1	inositol 1,4,5-trisphosphate receptor 1	Intron
Rr636108	regulatory region 636108	804 bp distal
Rr636109	regulatory region 636109	within coordinates