rs30060140 SNP Detail

Summary

• ID
  rs30060140
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52813483 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCAGTGAT GGCAAACCTT
  TGTCCTTTTA AAAGATCCAA AAATTACTTG AAGCCCAGTC AGGTGAATAA AATCCGAGGT
  TTACAGTACC TACCTTGGGT ACAGATATCA AGGATGTTTG TGTTTGTTTG GCTTGTTTTA
  TACTTTTGAA TGAGACAGAC CTATAGACTA ACAAAGCCTT TCTTCCTAGT GTGACAGAGA
  W
  TGCCATCCCT ATAGCCTTTC CAGGGCCTGT GTAGGGCTCT TGTGAATTAT CCATCATGGC
  CCTTGCCAAC CCTTGTGGAA GCAACATGCC TAACAACTGT CTCCTTTAGT GTCTGGAACT
  CCACAGGGCA GGGACCTTCC ATGCATTCTC GCTCTTCCTA ACCTGACACT GCGCTTTAAC
  TTAGGAATAA TAGCTTAGTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45390565	mCV25212729	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30060140					SNP	A	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52813483 () rs orientation: forward

Symbol	Name	Function Class
Gm20750	predicted gene, 20750	694 bp downstream
Rr576600	regulatory region 576600	1203 bp proximal
Rr576601	regulatory region 576601	1292 bp proximal