rs30059957 SNP Detail

Summary

• ID
  rs30059957
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125099051 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACAATACT TCCTCAACTG
  ATAACATTTA TGGAACAACA GTAGAGTTGC TTTAATGTAG TAAGTTATTT ATATTCCAAA
  AAGCCAAAGA CAGTGACTGT GGCCACATAA TTGATGAGTT AAACGAGTTT TCTTTCTGCA
  AAACAATTTT AAAGCTGAGT AACCCAAATT TATTAGCTGT GTCCAGATGG AGCATAAAGC
  Y
  AATATATTGT TGTTTATGCA TCAAGTCAGA TAAAATTATT AAGGATGATT TCAGCTGTGG
  ATGGTTAGGG TACGGGACCT TGGTTAAATT TTAAGGCTAT AATTCAAATA AATTTTAGTA
  GCTACAAAGC TTGAATAACA AATAGTCTAA GTGTGTTATA ATAGATTTTG TTGAACTATT
  TTACTGTTTT AAAATATATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45391627	mCV24036719	ABI	CRAMUS_MOUSE	f	SNP		T	C	C
ss135806107	ENSMUSSNP4419293	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
ss320935440	CHEV_3_125008320	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30059957					SNP	C	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125099051 () rs orientation: forward

Symbol	Name	Function Class
Rr584607	regulatory region 584607	1339 bp proximal