rs30059220 SNP Detail

Summary

• ID
  rs30059220
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130727747 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCACCTAGT TTATCTTACT GGCTTTCTGT GAAATATAGA
  TGTCTCACTT TTAGGGGTCG GACTACAATA TCGCTGAGAG ATAAGTAACA TTTGTTAAGT
  R
  GAGAAGCAAA AATTCCAACC TCCGACTTGG CCCAGTCTGA ACTCTCTGCT ACTGGTTCCG
  ACGTCACTAA TGGAACTCAA GTGCTTGACT GAGAAGTTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45390846	mCV23363603	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	G	A
ss135902505	ENSMUSSNP1807489	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30059220					SNP	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130727747 () rs orientation: forward

Symbol	Name	Function Class
2010110G14Rik	RIKEN cDNA 2010110G14 gene	within coordinates
Gm64594	predicted gene, 64594	186 bp upstream
Gm64601	predicted gene, 64601	759 bp downstream
Rr585238	regulatory region 585238	1509 bp distal
Rr585239	regulatory region 585239	1269 bp proximal