rs30059216 SNP Detail

Summary

• ID
  rs30059216
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:32387223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCT CCTGAGCTGC AACTCACTGT
  R
  CAGAAACTAT TCTGCCCCTG CCCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45390842	mCV24754892	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss134747971	ENSMUSSNP6190783	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss320697621	CHEV_3_32231996	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30059216					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:32387223 () rs orientation: forward

Symbol	Name	Function Class
Rr574940	regulatory region 574940	279 bp proximal
Rr574941	regulatory region 574941	531 bp proximal
Rr574942	regulatory region 574942	1840 bp proximal
Zmat3	zinc finger matrin type 3	1718 bp downstream