rs30057714 SNP Detail

Summary

• ID
  rs30057714
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:50592841 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATTT GTGTGTAATT GTGATATTAT
  R
  TGTCTGAGAT GCACTCGATG TTTAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
ss49595951	NES12915953	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	G			A	A
ss135164026	ENSMUSSNP5280014	ENSEMBL	ENSEMBL_Sanger	f	SNP		G				G
ss320758957	CHEV_3_50442314	CHEVERUD	SCREENING_POP	f	SNP							G			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
rs30057714					SNP	A	G	A	A	G	G	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49595951	NES12915953	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50592841 () rs orientation: forward

Symbol	Name	Function Class
Rr576165	regulatory region 576165	1512 bp proximal
Tssr33183	transcription start site region 33183	964 bp upstream