rs30052331 SNP Detail

Summary

• ID
  rs30052331
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:50650393 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGGAAGAA ATATAATTTC
  TCTTAAAAAA AAAAAACTTG CACCTTTGCC TCTCTCACAC ACATTCACAC AGCAAAGTAA
  ATGTCATTGT CTATTGAAGG TTGCTGGCAA CATTATTGAT TATACCATAG CCAATGAACA
  ACTCATGCAT TTTTAAACTC TGTAAGTTCT CAGTCCAACT GAGCCCTAAA CACAACGGAG
  R
  AAGTAAGCAA CATCATAAAT TGAAGGACAA GGAGTGTTTT AAAATGGGAT GGCCTGGGTA
  TGTAACTAAG GGGTGGAGCA CTTGCCTAGC ATGCAAAAGA TCTGGGTTTG ATTCTCAGTA
  GCACGAGACA GAGCGCGTTG AGGAGCGAGT GTATGGAAAG GCACAGCTAA CTGAAAGCAA
  GGATTCCTCA TGAGTTCCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49595717	NES12915320	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30052331					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49595717	NES12915320	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50650393 () rs orientation: forward

Symbol	Name	Function Class
Rr576169	regulatory region 576169	550 bp distal