rs30051817 SNP Detail

Summary

• ID
  rs30051817
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:50232086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCAATACA AATATAAATG
  CCTTGCAGTC AGAGAATATC TAATGCTTCG AGTAGGGGTA CTCGAAATTT AGAAAGCCCC
  GTAGGTGGGA TGAAGTTCTA TCTCAGCCTT CTACTTCCAG GGGAAGGATG TGCTGAGAAT
  TAAAAGGGGA GACAAGGGCA GGGACCCCTG GAAAAAGACC CCACAGCTTT CCACTGCACG
  K
  GATTGGCTGA CTGTACATTG CTTAGATGCA CGGCTTGCAG GATGCTTGCA AAGCTTTTCT
  TTGTACCAGG TTTGAAATGA TCCCTTATGA GTCTGACTGA CATGAGTGTA CTTCTGAATT
  TCCCTGCTGG CTATCCAACG TGTCTCTGAG CATCCTTTTA TTTTTATTTA TTAATTTATA
  TTTATTTGTG CTAAGATTTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49594485	NES12921003	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30051817					SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49594485	NES12921003	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50232086 () rs orientation: forward

Symbol	Name	Function Class
Rr576143	regulatory region 576143	505 bp proximal