rs30051535 SNP Detail

Summary

• ID
  rs30051535
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39276343 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAATTAAAG AAAGAGAAGC
  AAGTGATGTA TTTTTAAAAA TGAATGGCAA TATTTATAAA ATAGAATTAG GTTCAGACTT
  AATATTTACT TTCCTTTTAA TACTGGCTCC TAATAGAACT TGAAAACAGC TGGCTTTGTT
  GATGCGATGG TTCCATGTAA GACTGCATAT GGCCTGAATC GTTAAACTTC CATTTTCATC
  M
  GATTTATGCT TGGGAAAACT AACTGTACCC TTACAGTAAT TTATTATAGG CATCTCTTTG
  TTTGTCTTAG ATAGATCGCA GGAATGGCAG GATGGGACGA GATGAAATAG GACCCCAATT
  ACAGTTTAAA AGGCTTCCAA AATAGAGCAA CATTCAACTG GATCTTTCAT TACCACCATC
  TGCACTGTAT ATGTCATAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45389418	mCV24355752	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30051535					SNP	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39276343 () rs orientation: forward

Symbol	Name	Function Class
Rr575743	regulatory region 575743	1197 bp distal
Rr575744	regulatory region 575744	1272 bp distal