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rs30050508 SNP Detail
Summary
  • ID
    rs30050508
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr3:54578440 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          ACATATAATA TTCATTAATA CACAATAAAA TATTGGTGCT
    TTTCTATGTA GGATTTACTT AGAGGAGAGT TAAGTTCCTT AGGATTGTAG AGGCCTGAGG
    Y
    ATCAAGGACA CCGCAAGAAA ACTCTCAGGG CCCATAGGAG CTGGCAGAGA CTAAACCAAC
    AATCAGAGAG CCTCCATGGG TCTGACCTAG GACCTCTAC                       
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
C57BL/6J
DBA/2J
ss45389290 mCV25034119 ABI CRAMUS_MOUSE f SNP C C T
ss135184706 ENSMUSSNP4603592 ENSEMBL ENSEMBL_Sanger f SNP C T
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
C57BL/6J
DBA/2J
rs30050508 SNP C C T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:54578440 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr374984 regulatory region 374984 1530 bp downstream
Rr576825 regulatory region 576825 1253 bp distal
Rr576826 regulatory region 576826 1678 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory