rs30050508 SNP Detail

Summary

• ID
  rs30050508
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54578440 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACATATAATA TTCATTAATA CACAATAAAA TATTGGTGCT
  TTTCTATGTA GGATTTACTT AGAGGAGAGT TAAGTTCCTT AGGATTGTAG AGGCCTGAGG
  Y
  ATCAAGGACA CCGCAAGAAA ACTCTCAGGG CCCATAGGAG CTGGCAGAGA CTAAACCAAC
  AATCAGAGAG CCTCCATGGG TCTGACCTAG GACCTCTAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45389290	mCV25034119	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss135184706	ENSMUSSNP4603592	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs30050508					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54578440 () rs orientation: forward

Symbol	Name	Function Class
Rr374984	regulatory region 374984	1530 bp downstream
Rr576825	regulatory region 576825	1253 bp distal
Rr576826	regulatory region 576826	1678 bp proximal